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3d/filter.hh
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1/* -*- mia-c++ -*-
2 *
3 * This file is part of MIA - a toolbox for medical image analysis
4 * Copyright (c) Leipzig, Madrid 1999-2017 Gert Wollny
5 *
6 * MIA is free software; you can redistribute it and/or modify
7 * it under the terms of the GNU General Public License as published by
8 * the Free Software Foundation; either version 3 of the License, or
9 * (at your option) any later version.
10 *
11 * This program is distributed in the hope that it will be useful,
12 * but WITHOUT ANY WARRANTY; without even the implied warranty of
13 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14 * GNU General Public License for more details.
15 *
16 * You should have received a copy of the GNU General Public License
17 * along with MIA; if not, see <http://www.gnu.org/licenses/>.
18 *
19 */
20
21#ifndef mia_3d_filter_hh
22#define mia_3d_filter_hh
23
24#include <boost/any.hpp>
25
26#include <mia/3d/image.hh>
27#include <mia/core/combiner.hh>
28#include <mia/core/factory.hh>
29#include <mia/core/filter.hh>
33
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36
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50
56
61typedef std::shared_ptr<C3DFilter> P3DFilter;
62
71typedef std::shared_ptr<C3DImageCombiner> P3DImageCombiner;
73
77
78
83
84
93template <typename S>
94std::vector<P3DFilter> create_filter_chain(const std::vector<S>& chain)
95{
96 std::vector<P3DFilter> filters;
97
98 for (typename std::vector<S>::const_iterator i = chain.begin();
99 i != chain.end(); ++i) {
100 cvdebug() << "Prepare filter " << *i << std::endl;
101 auto filter = C3DFilterPluginHandler::instance().produce(*i);
102
103 if (!filter) {
104 std::stringstream error;
105 error << "Filter " << *i << " not found";
106 throw std::invalid_argument(error.str());
107 }
108
109 filters.push_back(filter);
110 }
111
112 return filters;
113}
114
120
121
125inline P3DFilter produce_3dimage_filter(const char *descr)
126{
127 return C3DFilterPluginHandler::instance().produce(descr);
128}
129
130
138P3DImage EXPORT_3D run_filter(const C3DImage& image, const char *filter);
139
140
149P3DImage EXPORT_3D run_filter_chain(P3DImage image, const std::vector<const char *>& filters);
150
151
153
154
155#endif
TFactory< C3DImageCombiner > C3DImageCombinerPlugin
Definition: 3d/filter.hh:72
P3DFilter produce_3dimage_filter(const char *descr)
Definition: 3d/filter.hh:125
std::shared_ptr< C3DImageCombiner > P3DImageCombiner
Definition: 3d/filter.hh:71
THandlerSingleton< TFactoryPluginHandler< C3DImageCombinerPlugin > > C3DImageCombinerPluginHandler
Plugin handler for image combiner plugins.
Definition: 3d/filter.hh:76
C3DImage::Pointer P3DImage
define a shortcut to the 3D image shared pointer.
Definition: 3d/image.hh:135
The generic base type of a 3D image.
Definition: 3d/image.hh:47
Generic image filter plugin base.
Definition: core/filter.hh:186
Generic interface class to data filters.
Definition: core/filter.hh:87
This is tha base of all plugins that create "things", like filters, cost functions time step operator...
Definition: factory.hh:51
create and use a chain of filters
Definition: filter_chain.hh:41
the singleton that a plug-in handler really is
Definition: handler.hh:159
static const T & instance()
#define EXPORT_3D
Definition: defines3d.hh:45
#define NS_MIA_BEGIN
conveniance define to start the mia namespace
Definition: defines.hh:33
#define NS_MIA_END
conveniance define to end the mia namespace
Definition: defines.hh:36
THandlerSingleton< TFactoryPluginHandler< C3DFilterPlugin > > C3DFilterPluginHandler
The 3D filter plugin handler.
Definition: 3d/filter.hh:55
TDataFilterPlugin< C3DImage > C3DFilterPlugin
The 3D filter plugin type.
Definition: 3d/filter.hh:49
TFilterChain< C3DFilterPluginHandler > C3DImageFilterChain
3D filter chain to apply various filters in one run
Definition: 3d/filter.hh:119
P3DImage EXPORT_3D run_filter(const C3DImage &image, const char *filter)
convenience function: create and run a filter on an image
TImageCombiner< C3DImage > C3DImageCombiner
Base class for plug-ins that combine two 3D images in certain ways.
Definition: 3d/filter.hh:70
static F::result_type filter(const F &f, const B &b)
Definition: core/filter.hh:258
TDataFilter< C3DImage > C3DFilter
Base class for 3D image filters. Filters are implemented as plug-ins.
Definition: 3d/filter.hh:43
std::vector< P3DFilter > create_filter_chain(const std::vector< S > &chain)
Convenience function to create a filter chain from a series of filter descriptions.
Definition: 3d/filter.hh:94
std::shared_ptr< C3DFilter > P3DFilter
The 3D filter shared pointer.
Definition: 3d/filter.hh:61
P3DImage EXPORT_3D run_filter_chain(P3DImage image, const std::vector< const char * > &filters)
#define FACTORY_TRAIT(F)
CDebugSink & cvdebug()
Definition: msgstream.hh:226